If it is HONEY and not bee-processed sugar in the frames, simply give the bees
room in supers.  If they need the space for brood and have somewhere else to
put the honey they will move it. They know how they want their larder arranged
far better than you do. If the frames contain non honey stores, remove them to
avoid contamination of the real thing.  Use them to feed nuclei or weak
colonies.
Chris Slade